Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm43812-202ENSMUST00000202701 581 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm46231-201ENSMUST00000220152 314 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.3□□□□□ -1.08
Cchcr1Q8K2I2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm15739-201ENSMUST00000118049 872 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Mir7115-201ENSMUST00000184275 64 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm18349-201ENSMUST00000187440 904 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm3511-201ENSMUST00000199823 204 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm4270-201ENSMUST00000209666 406 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm5528-201ENSMUST00000076314 480 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cchcr1Q8K2I2 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm8421-201ENSMUST00000119439 305 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm14796-201ENSMUST00000121216 959 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm22552-201ENSMUST00000157796 337 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm17217-201ENSMUST00000166613 469 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm28573-201ENSMUST00000187821 380 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm28145-201ENSMUST00000189742 380 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm28400-201ENSMUST00000191332 380 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm23011-202ENSMUST00000197855 275 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Snora9-201ENSMUST00000082579 133 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cchcr1Q8K2I2 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Cchcr1Q8K2I2 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Cchcr1Q8K2I2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Cchcr1Q8K2I2 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Cchcr1Q8K2I2 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Cchcr1Q8K2I2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms