Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm44565-201ENSMUST00000208194 269 ntBASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm4796-201ENSMUST00000219802 624 ntBASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm22053-201ENSMUST00000083394 200 ntBASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.23□□□□□ -1.25
Trub1Q8C0D0 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trub1Q8C0D0 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm26416-201ENSMUST00000104280 134 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm14584-201ENSMUST00000118956 637 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm16284-201ENSMUST00000140995 400 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm22132-201ENSMUST00000175316 100 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm26179-201ENSMUST00000177723 132 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm17786-201ENSMUST00000182000 427 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Mir8097-201ENSMUST00000185150 119 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm38373-201ENSMUST00000192042 288 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm18430-201ENSMUST00000197534 682 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm5080-201ENSMUST00000220341 743 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.22□□□□□ -1.25
Trub1Q8C0D0 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trub1Q8C0D0 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Trub1Q8C0D0 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Trub1Q8C0D0 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.21□□□□□ -1.25
Trub1Q8C0D0 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trub1Q8C0D0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trub1Q8C0D0 AC183268.1-201ENSMUST00000215753 2837 ntBASIC7.21□□□□□ -1.25
Trub1Q8C0D0 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm25498-201ENSMUST00000104424 129 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm14869-201ENSMUST00000119007 884 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm14156-201ENSMUST00000121538 483 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm23392-201ENSMUST00000157580 113 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm7244-201ENSMUST00000164658 455 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm8245-201ENSMUST00000182434 987 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm27596-201ENSMUST00000185061 83 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm28958-201ENSMUST00000185864 703 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm43108-201ENSMUST00000200525 293 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm44380-201ENSMUST00000203125 293 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm10126-201ENSMUST00000221732 168 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.21□□□□□ -1.26
Trub1Q8C0D0 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms