Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Shank3Q4ACU6 Gm8424-201ENSMUST00000117716 988 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm7952-201ENSMUST00000180540 984 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm27210-201ENSMUST00000184263 402 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm42437-201ENSMUST00000197263 923 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm17908-201ENSMUST00000205552 1256 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 AC151904.3-201ENSMUST00000219266 895 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm6056-201ENSMUST00000221253 488 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 AC120375.2-202ENSMUST00000228722 397 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm15616-201ENSMUST00000118662 375 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm7152-201ENSMUST00000163570 605 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm26509-201ENSMUST00000180947 948 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Mir7220-201ENSMUST00000183978 60 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm5612-201ENSMUST00000053326 375 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Olfr519-201ENSMUST00000084752 960 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.68□□□□□ -1.02
Shank3Q4ACU6 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Shank3Q4ACU6 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm7113-201ENSMUST00000120477 958 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm8648-201ENSMUST00000122457 221 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm27460-201ENSMUST00000184213 100 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm37187-201ENSMUST00000193425 341 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm45782-201ENSMUST00000212670 366 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm18586-201ENSMUST00000217265 518 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 AC140930.1-201ENSMUST00000221889 389 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm33312-201ENSMUST00000222443 332 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Shank3Q4ACU6 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms