Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm45845-201ENSMUST00000207326 582 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm45319-201ENSMUST00000210220 318 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm18329-201ENSMUST00000215832 589 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm25546-201ENSMUST00000103977 132 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm22438-201ENSMUST00000104049 132 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Mir466f-2-201ENSMUST00000104805 94 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm5752-201ENSMUST00000117771 594 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm15913-201ENSMUST00000118492 331 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm5255-201ENSMUST00000120125 642 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm6428-201ENSMUST00000161062 345 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm5283-201ENSMUST00000177874 334 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm5181-201ENSMUST00000183140 971 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm4545-201ENSMUST00000190797 603 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm17965-201ENSMUST00000193904 517 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm3103-201ENSMUST00000198073 752 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AC117949.2-201ENSMUST00000225900 584 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp39Q3TIX9 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp39Q3TIX9 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms