Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm6823-201ENSMUST00000120791 1839 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm43123-201ENSMUST00000201893 3471 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm24986-201ENSMUST00000104452 132 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm24195-201ENSMUST00000116804 137 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm12757-201ENSMUST00000119465 800 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm11278-201ENSMUST00000121002 997 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm4887-201ENSMUST00000122230 1053 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm16284-201ENSMUST00000140995 400 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm11962-201ENSMUST00000145746 255 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm24241-201ENSMUST00000157787 145 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm25437-201ENSMUST00000158282 132 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm19791-201ENSMUST00000180398 859 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Mir8099-2-201ENSMUST00000183568 127 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Mir8099-1-201ENSMUST00000184238 127 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm29161-201ENSMUST00000188250 699 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm44137-201ENSMUST00000203670 367 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm43928-201ENSMUST00000203737 409 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm18690-201ENSMUST00000204488 985 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm5314-201ENSMUST00000204852 466 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm8489-201ENSMUST00000209876 1152 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm32842-201ENSMUST00000212653 738 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm10688-201ENSMUST00000214985 520 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm7392-201ENSMUST00000217815 345 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 AC163296.1-201ENSMUST00000220004 1266 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 AC132237.2-201ENSMUST00000221702 1209 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 CT009733.1-203ENSMUST00000224033 451 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm24919-201ENSMUST00000083020 106 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm43623-201ENSMUST00000199289 2663 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx4Q07424 Gm44897-201ENSMUST00000206187 1341 ntBASIC5.74□□□□□ -1.49
Cdx4Q07424 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx4Q07424 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm14373-201ENSMUST00000122467 2158 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx4Q07424 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC5.73□□□□□ -1.49
Cdx4Q07424 AC166159.1-201ENSMUST00000227154 1380 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx4Q07424 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm22022-201ENSMUST00000104355 127 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm15933-201ENSMUST00000117215 616 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm13526-201ENSMUST00000117970 189 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm8624-201ENSMUST00000118083 432 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm13858-201ENSMUST00000118862 671 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm12993-201ENSMUST00000119900 479 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.73□□□□□ -1.49
Cdx4Q07424 Gm14826-201ENSMUST00000121284 901 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms