Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.74□□□□□ -1.17
CiitaP79621 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CiitaP79621 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CiitaP79621 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Gm25311-201ENSMUST00000104136 132 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm25344-201ENSMUST00000104503 132 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm11689-201ENSMUST00000120766 302 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm25178-201ENSMUST00000122633 325 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm22728-201ENSMUST00000158087 129 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Gm26607-201ENSMUST00000180661 867 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CiitaP79621 Gm2860-201ENSMUST00000199226 707 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm19764-201ENSMUST00000203630 649 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Gm18907-201ENSMUST00000209719 932 ntBASIC7.74□□□□□ -1.17
CiitaP79621 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.74□□□□□ -1.17
CiitaP79621 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.74□□□□□ -1.17
CiitaP79621 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CiitaP79621 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CiitaP79621 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
CiitaP79621 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.73□□□□□ -1.17
CiitaP79621 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Gm27360-201ENSMUST00000183487 80 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm43212-201ENSMUST00000198208 394 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm3549-201ENSMUST00000203873 794 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm2975-201ENSMUST00000209710 820 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.73□□□□□ -1.17
CiitaP79621 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm9110-201ENSMUST00000219035 617 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Gm23054-201ENSMUST00000082804 162 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CiitaP79621 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CiitaP79621 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.73□□□□□ -1.17
CiitaP79621 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
CiitaP79621 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.72□□□□□ -1.17
CiitaP79621 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CiitaP79621 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CiitaP79621 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm11858-201ENSMUST00000117935 838 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Gm25969-201ENSMUST00000157166 132 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.72□□□□□ -1.17
CiitaP79621 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CiitaP79621 Mir8105-201ENSMUST00000184718 89 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CiitaP79621 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.72□□□□□ -1.17
CiitaP79621 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Gm2221-201ENSMUST00000209342 418 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.72□□□□□ -1.17
CiitaP79621 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
CiitaP79621 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CiitaP79621 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CiitaP79621 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CiitaP79621 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms