Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Gm21742-201ENSMUST00000189352 548 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Gm28648-201ENSMUST00000190092 343 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Gm37339-201ENSMUST00000194142 392 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Gm40319-201ENSMUST00000199785 481 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.3□□□□□ -1.08
Nub1P54729 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.3□□□□□ -1.08
Nub1P54729 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.3□□□□□ -1.08
Nub1P54729 AC124715.1-201ENSMUST00000228480 754 ntBASIC8.3□□□□□ -1.08
Nub1P54729 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.3□□□□□ -1.08
Nub1P54729 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nub1P54729 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.3□□□□□ -1.08
Nub1P54729 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
Nub1P54729 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Nub1P54729 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nub1P54729 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Nub1P54729 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Nub1P54729 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Nub1P54729 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm12838-201ENSMUST00000116278 325 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm8858-201ENSMUST00000118259 342 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm11969-201ENSMUST00000118848 356 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm14450-201ENSMUST00000119984 240 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm15194-201ENSMUST00000120453 434 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm15227-201ENSMUST00000121844 399 ntBASIC8.29□□□□□ -1.08
Nub1P54729 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.29□□□□□ -1.08
Nub1P54729 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm28546-201ENSMUST00000188221 615 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm28384-201ENSMUST00000189079 463 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm28728-201ENSMUST00000189087 405 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm6321-201ENSMUST00000194460 1090 ntBASIC8.29□□□□□ -1.08
Nub1P54729 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm31306-201ENSMUST00000197517 508 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm43245-201ENSMUST00000197603 468 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Mir1897-202ENSMUST00000198006 79 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm45756-201ENSMUST00000212491 407 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.29□□□□□ -1.08
Nub1P54729 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.29□□□□□ -1.08
Nub1P54729 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Desi2-202ENSMUST00000069568 1193 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm10704-201ENSMUST00000098952 730 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Malat1-201ENSMUST00000172812 6983 ntBASIC8.29□□□□□ -1.08
Nub1P54729 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.29□□□□□ -1.08
Nub1P54729 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Nub1P54729 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nub1P54729 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms