Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm22224-201ENSMUST00000157357 93 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm24039-201ENSMUST00000157878 132 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm22923-201ENSMUST00000174952 110 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm26784-201ENSMUST00000181666 410 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm17828-201ENSMUST00000183380 799 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm6750-201ENSMUST00000189273 268 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm18537-201ENSMUST00000205709 989 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm8952-201ENSMUST00000206828 1102 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm8058-201ENSMUST00000217247 587 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8.93□□□□□ -0.98
Rfx1P48377 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Olfr480-201ENSMUST00000071658 1029 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm22575-201ENSMUST00000082981 110 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm9408-201ENSMUST00000197375 1505 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.92□□□□□ -0.98
Rfx1P48377 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.92□□□□□ -0.98
Rfx1P48377 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rfx1P48377 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Rfx1P48377 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rfx1P48377 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Mir669o-201ENSMUST00000103898 96 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm13649-201ENSMUST00000122325 606 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm16300-201ENSMUST00000160031 1279 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm24465-201ENSMUST00000178398 107 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm6931-201ENSMUST00000183103 371 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm27288-201ENSMUST00000184215 80 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm27597-201ENSMUST00000184365 80 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm27506-201ENSMUST00000184558 80 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm27529-201ENSMUST00000184975 80 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Gm27907-201ENSMUST00000185101 80 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC8.92□□□□□ -0.98
Rfx1P48377 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Gm45283-201ENSMUST00000210593 628 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rfx1P48377 AC153801.1-201ENSMUST00000217904 947 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 AC154738.3-201ENSMUST00000227953 409 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 AC154528.3-201ENSMUST00000228011 679 ntBASIC8.92□□□□□ -0.98
Rfx1P48377 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rfx1P48377 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rfx1P48377 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.92□□□□□ -0.98
Rfx1P48377 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms