Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 CT010505.3-201ENSMUST00000227835 1651 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm25724-201ENSMUST00000104531 117 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm14018-201ENSMUST00000119042 455 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm12307-201ENSMUST00000120581 590 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm12518-201ENSMUST00000122075 779 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm22262-201ENSMUST00000158713 86 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm27210-201ENSMUST00000184263 402 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.38□□□□□ -1.23
Cxcl12P40224 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.38□□□□□ -1.23
Cxcl12P40224 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.38□□□□□ -1.23
Cxcl12P40224 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Cxcl12P40224 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Cxcl12P40224 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Cxcl12P40224 AC122346.2-201ENSMUST00000224326 2931 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Cxcl12P40224 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm14466-201ENSMUST00000119028 451 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm12101-201ENSMUST00000121590 390 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm27348-201ENSMUST00000184511 170 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm28952-201ENSMUST00000189285 681 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm38097-201ENSMUST00000192936 439 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm5694-201ENSMUST00000195648 641 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm3511-201ENSMUST00000199823 204 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm4556-201ENSMUST00000217808 355 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.37□□□□□ -1.23
Cxcl12P40224 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC7.37□□□□□ -1.23
Cxcl12P40224 AC155270.1-201ENSMUST00000221626 4028 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.37□□□□□ -1.23
Cxcl12P40224 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Cxcl12P40224 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms