Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm5272-201ENSMUST00000182730 982 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
Traf1P39428 Gm29383-201ENSMUST00000188284 480 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm37883-201ENSMUST00000194970 725 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm24826-202ENSMUST00000197298 216 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm43235-201ENSMUST00000200121 297 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm9604-201ENSMUST00000211175 433 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Traf1P39428 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
Traf1P39428 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Traf1P39428 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.33□□□□□ -1.08
Traf1P39428 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.33□□□□□ -1.08
Traf1P39428 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Traf1P39428 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.32□□□□□ -1.08
Traf1P39428 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.32□□□□□ -1.08
Traf1P39428 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Traf1P39428 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Traf1P39428 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Traf1P39428 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm16113-201ENSMUST00000159629 372 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm17212-201ENSMUST00000166666 259 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Traf1P39428 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.32□□□□□ -1.08
Traf1P39428 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm4525-201ENSMUST00000198831 254 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.32□□□□□ -1.08
Traf1P39428 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.32□□□□□ -1.08
Traf1P39428 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.32□□□□□ -1.08
Traf1P39428 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm6419-201ENSMUST00000097166 429 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Traf1P39428 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.32□□□□□ -1.08
Traf1P39428 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.32□□□□□ -1.08
Traf1P39428 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.32□□□□□ -1.08
Traf1P39428 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.32□□□□□ -1.08
Traf1P39428 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Traf1P39428 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
Traf1P39428 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm21051-201ENSMUST00000221757 1688 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm13423-201ENSMUST00000117205 888 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Gm15203-201ENSMUST00000117668 455 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Gm26480-201ENSMUST00000122619 297 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm25989-201ENSMUST00000158761 133 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Gm22533-201ENSMUST00000158821 274 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Gm6428-201ENSMUST00000161062 345 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Mir6908-201ENSMUST00000184056 63 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Mir6403-201ENSMUST00000185007 129 ntBASIC8.31□□□□□ -1.08
Traf1P39428 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm30517-201ENSMUST00000197350 772 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm43929-201ENSMUST00000203025 409 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Gm19154-201ENSMUST00000223330 940 ntBASIC8.31□□□□□ -1.08
Traf1P39428 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.31□□□□□ -1.08
Traf1P39428 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms