Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm18537-202ENSMUST00000206215 1503 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm22900-201ENSMUST00000104538 130 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm12684-201ENSMUST00000118675 999 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm11198-201ENSMUST00000119771 974 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm11933-201ENSMUST00000121550 375 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm25265-201ENSMUST00000158520 347 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm25692-201ENSMUST00000175444 125 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm7593-201ENSMUST00000187246 644 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm37108-201ENSMUST00000194605 626 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb3O54879 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm20121-201ENSMUST00000198547 1594 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm13521-201ENSMUST00000118922 866 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm15007-201ENSMUST00000119982 710 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm15062-201ENSMUST00000120567 367 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm12630-201ENSMUST00000121575 784 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm26408-201ENSMUST00000157672 127 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm7734-201ENSMUST00000182832 1011 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm5839-201ENSMUST00000182835 1007 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm27218-201ENSMUST00000183745 392 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm28416-201ENSMUST00000188334 292 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm28952-201ENSMUST00000189285 681 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm36982-201ENSMUST00000193796 1128 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Ighv10-2-201ENSMUST00000195182 298 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm44156-201ENSMUST00000203885 1189 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm44192-201ENSMUST00000204195 556 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm30619-201ENSMUST00000213962 686 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.69□□□□□ -1.5
Hmgb3O54879 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb3O54879 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb3O54879 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms