Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a6B1AVK5 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm25346-201ENSMUST00000104509 128 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.24□□□□□ -1.25
Col4a6B1AVK5 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
Col4a6B1AVK5 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm13352-201ENSMUST00000117515 262 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm8648-201ENSMUST00000122457 221 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm20223-201ENSMUST00000199932 805 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm7554-201ENSMUST00000202282 574 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm46203-201ENSMUST00000218130 478 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Zfp850-201ENSMUST00000099111 941 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm37120-201ENSMUST00000193350 5959 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col4a6B1AVK5 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms