Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC165260.4-201ENSMUST00000225924 724 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 AC131033.2-201ENSMUST00000228138 1011 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm22439-201ENSMUST00000104048 132 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm9427-201ENSMUST00000116187 651 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm2199-201ENSMUST00000119065 874 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm12219-201ENSMUST00000119198 443 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm5759-201ENSMUST00000119203 811 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm24139-201ENSMUST00000122780 288 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm3757-201ENSMUST00000125878 675 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm17973-201ENSMUST00000174509 520 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Mir6409-201ENSMUST00000184957 92 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm5791-201ENSMUST00000220840 489 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ddx56Q9D0R4 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ddx56Q9D0R4 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm25725-201ENSMUST00000104528 130 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm15078-201ENSMUST00000118371 782 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm13545-201ENSMUST00000119044 482 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm15160-201ENSMUST00000120553 907 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm26729-201ENSMUST00000180744 352 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm27218-201ENSMUST00000183745 392 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm37295-201ENSMUST00000192186 109 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm19104-201ENSMUST00000198392 679 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms