Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm18503-201ENSMUST00000220340 728 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc47Q9D024 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Ccdc47Q9D024 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Cmah-208ENSMUST00000224819 9482 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm14727-201ENSMUST00000118526 525 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm14721-201ENSMUST00000121381 525 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm24057-201ENSMUST00000158616 302 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm7481-201ENSMUST00000182020 995 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Pea15b-201ENSMUST00000182806 387 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm7419-201ENSMUST00000209962 925 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm6667-201ENSMUST00000217169 564 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Gm36758-201ENSMUST00000222594 310 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.33□□□□□ -1.08
Ccdc47Q9D024 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc47Q9D024 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm8624-201ENSMUST00000118083 432 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm13006-201ENSMUST00000118683 214 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm12740-201ENSMUST00000118794 308 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm22035-201ENSMUST00000157284 228 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm5261-201ENSMUST00000185860 713 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm37349-201ENSMUST00000194205 624 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm43725-201ENSMUST00000200122 369 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 AV026068-219ENSMUST00000224148 933 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc47Q9D024 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms