Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm34583-203ENSMUST00000202586 454 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm25799-201ENSMUST00000082643 107 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm24613-201ENSMUST00000083266 130 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm42679-201ENSMUST00000197086 2906 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm23484-201ENSMUST00000104178 131 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm15048-201ENSMUST00000118201 954 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm5759-201ENSMUST00000119203 811 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm23777-201ENSMUST00000158994 259 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm25947-201ENSMUST00000180343 110 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm18709-201ENSMUST00000180564 489 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm42932-201ENSMUST00000197280 744 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm18484-201ENSMUST00000204389 991 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm6681-201ENSMUST00000205215 607 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm2089-201ENSMUST00000218294 479 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC153932.1-201ENSMUST00000218558 787 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.95□□□□□ -1.3
Clrn1Q8K445 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Clrn1Q8K445 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms