Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Brf1Q8CFK2 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.52□□□□□ -1.04
Brf1Q8CFK2 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Brf1Q8CFK2 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm16357-201ENSMUST00000144091 474 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm7651-201ENSMUST00000173398 901 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm23018-201ENSMUST00000177928 109 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm26528-201ENSMUST00000181965 283 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm8275-201ENSMUST00000219732 424 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.52□□□□□ -1.05
Brf1Q8CFK2 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Mir697-201ENSMUST00000102316 109 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm9439-201ENSMUST00000119554 973 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm14363-201ENSMUST00000122304 409 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Mir1930-201ENSMUST00000158799 84 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm42580-201ENSMUST00000197223 753 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm43316-201ENSMUST00000197252 1295 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm38430-201ENSMUST00000209888 1240 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm9604-201ENSMUST00000211175 433 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm7439-201ENSMUST00000214053 835 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Mir455-201ENSMUST00000093594 82 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.51□□□□□ -1.05
Brf1Q8CFK2 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Brf1Q8CFK2 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm26417-201ENSMUST00000104274 135 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm17046-201ENSMUST00000168078 850 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.5□□□□□ -1.05
Brf1Q8CFK2 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms