Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm5454-201ENSMUST00000052030 1453 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm14865-201ENSMUST00000117523 494 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm15310-201ENSMUST00000117891 372 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm12713-201ENSMUST00000118404 764 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm14070-201ENSMUST00000120773 428 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm12504-202ENSMUST00000148026 306 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm16298-201ENSMUST00000161107 420 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm17834-201ENSMUST00000204322 891 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 AC154904.1-201ENSMUST00000219510 312 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm8872-201ENSMUST00000197475 1341 ntBASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp40Q8BWR4 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 AC159196.3-201ENSMUST00000224307 1841 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm6451-201ENSMUST00000121488 717 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm27804-201ENSMUST00000185135 119 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm43555-201ENSMUST00000196588 310 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm42474-201ENSMUST00000201073 505 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm44896-201ENSMUST00000206190 772 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 AC148328.2-201ENSMUST00000216960 262 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm9800-201ENSMUST00000052615 336 ntBASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp40Q8BWR4 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usp40Q8BWR4 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usp40Q8BWR4 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usp40Q8BWR4 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usp40Q8BWR4 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usp40Q8BWR4 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Usp40Q8BWR4 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm15575-201ENSMUST00000119414 1581 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm13141-201ENSMUST00000117417 456 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm12778-201ENSMUST00000122341 333 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm3585-201ENSMUST00000173438 875 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm29141-201ENSMUST00000190357 882 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm5154-201ENSMUST00000203971 399 ntBASIC9.77□□□□□ -0.85
Usp40Q8BWR4 Gm34272-201ENSMUST00000208886 253 ntBASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms