Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gm9801-201ENSMUST00000054860 408 ntBASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp2bQ8BJF9 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm24738-201ENSMUST00000158856 123 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Mir6409-201ENSMUST00000184957 92 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm5920-201ENSMUST00000187390 853 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm29435-201ENSMUST00000191310 689 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm10416-201ENSMUST00000197379 645 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm26413-202ENSMUST00000198972 127 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm20274-201ENSMUST00000206967 584 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm44943-201ENSMUST00000207254 300 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm5316-201ENSMUST00000050391 270 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp2bQ8BJF9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Chmp2bQ8BJF9 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm23276-201ENSMUST00000157913 138 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm17973-201ENSMUST00000174509 520 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm36928-201ENSMUST00000192466 694 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm37325-201ENSMUST00000194971 694 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm2505-201ENSMUST00000200413 825 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Gm42734-201ENSMUST00000201656 878 ntBASIC7.21□□□□□ -1.26
Chmp2bQ8BJF9 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 200.6 ms