Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm18867-201ENSMUST00000198022 1179 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm44281-201ENSMUST00000203090 166 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm5723-201ENSMUST00000203096 432 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm8999-201ENSMUST00000204951 969 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm45014-201ENSMUST00000207657 405 ntTSL 3 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm7210-201ENSMUST00000209309 1067 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm45275-201ENSMUST00000210057 365 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm45827-201ENSMUST00000211955 311 ntTSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.53□□□□□ -1.36
Foxc1Q61572 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC6.53□□□□□ -1.36
Foxc1Q61572 4933407I05Rik-203ENSMUST00000214646 796 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm7614-201ENSMUST00000222235 328 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm23407-201ENSMUST00000082538 91 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Mir212-201ENSMUST00000083656 91 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Chrdl2-201ENSMUST00000032977 1520 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Zfp69-202ENSMUST00000106281 1764 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm5315-201ENSMUST00000204430 1897 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Ccdc80-201ENSMUST00000061050 3648 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Foxc1Q61572 D430036J16Rik-202ENSMUST00000181447 1732 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Foxc1Q61572 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.53□□□□□ -1.36
Foxc1Q61572 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Foxc1Q61572 Gm37069-201ENSMUST00000192742 4142 ntBASIC6.52□□□□□ -1.36
Foxc1Q61572 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Foxc1Q61572 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
Foxc1Q61572 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.52□□□□□ -1.36
Foxc1Q61572 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Foxc1Q61572 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Foxc1Q61572 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Fmo6-201ENSMUST00000178465 1691 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Tgm5-201ENSMUST00000028721 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Ywhae-201ENSMUST00000067664 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Catspere1-201ENSMUST00000194528 2949 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm42944-201ENSMUST00000198383 3980 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Ndufs1-201ENSMUST00000027111 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gbp8-202ENSMUST00000112718 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm6964-201ENSMUST00000117206 437 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm8855-201ENSMUST00000118888 878 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm13655-201ENSMUST00000119695 745 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm13357-201ENSMUST00000120528 537 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm14620-201ENSMUST00000120656 383 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm14678-201ENSMUST00000121396 482 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm14983-201ENSMUST00000121551 323 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm15885-201ENSMUST00000122114 388 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm16152-202ENSMUST00000143261 1189 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm24991-201ENSMUST00000157405 108 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm24741-201ENSMUST00000158857 106 ntBASIC6.52□□□□□ -1.37
Foxc1Q61572 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Gm17304-201ENSMUST00000167618 69 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Foxc1Q61572 Olfr93-201ENSMUST00000171679 1045 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms