Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm13858-201ENSMUST00000118862 671 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm12632-201ENSMUST00000121223 495 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm11383-201ENSMUST00000121346 807 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm25164-201ENSMUST00000158908 116 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm24923-201ENSMUST00000178201 88 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm7763-201ENSMUST00000182220 1006 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm29496-201ENSMUST00000189854 693 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm36966-201ENSMUST00000192217 413 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm44471-201ENSMUST00000197963 100 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm6590-201ENSMUST00000203343 687 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm44332-201ENSMUST00000203712 433 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm46311-201ENSMUST00000217971 203 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Zfp850-201ENSMUST00000099111 941 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp39Q3TIX9 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm11945-201ENSMUST00000120551 476 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm5445-201ENSMUST00000180224 480 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm18428-201ENSMUST00000194986 791 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Gm20223-201ENSMUST00000199932 805 ntBASIC7.07□□□□□ -1.28
Usp39Q3TIX9 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms