Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm44007-201ENSMUST00000203845 2189 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm42435-201ENSMUST00000196630 1448 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Col8a1Q00780 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm35172-201ENSMUST00000196037 2649 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm13243-201ENSMUST00000117481 565 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm14826-201ENSMUST00000121284 901 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm12706-201ENSMUST00000121588 698 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm22223-201ENSMUST00000157360 125 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm8540-201ENSMUST00000168952 732 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.57□□□□□ -1.36
Col8a1Q00780 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm19039-201ENSMUST00000204363 575 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm5418-201ENSMUST00000206932 528 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm45551-201ENSMUST00000211459 928 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.57□□□□□ -1.36
Col8a1Q00780 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm25926-201ENSMUST00000082899 160 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC6.57□□□□□ -1.36
Col8a1Q00780 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm3203-201ENSMUST00000197670 2389 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm16465-201ENSMUST00000118585 1758 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.57□□□□□ -1.36
Col8a1Q00780 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col8a1Q00780 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm37980-201ENSMUST00000194420 1910 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm37675-201ENSMUST00000192303 2847 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm6284-201ENSMUST00000209609 4287 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms