Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm21839-201ENSMUST00000179536 378 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm28801-201ENSMUST00000188761 449 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm37669-201ENSMUST00000192184 820 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm37526-201ENSMUST00000194640 619 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm43203-201ENSMUST00000200130 558 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.76□□□□□ -1.17
CiitaP79621 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.76□□□□□ -1.17
CiitaP79621 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.76□□□□□ -1.17
CiitaP79621 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.76□□□□□ -1.17
CiitaP79621 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm9800-201ENSMUST00000052615 336 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CiitaP79621 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CiitaP79621 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CiitaP79621 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm22774-201ENSMUST00000102084 109 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm14631-201ENSMUST00000119067 594 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Gm22275-201ENSMUST00000122470 310 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.75□□□□□ -1.17
CiitaP79621 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm17212-201ENSMUST00000166666 259 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.75□□□□□ -1.17
CiitaP79621 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Gm4373-201ENSMUST00000178571 556 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Gm8245-201ENSMUST00000182434 987 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Mir6908-201ENSMUST00000184056 63 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CiitaP79621 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm2840-201ENSMUST00000048361 411 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CiitaP79621 Gm5446-201ENSMUST00000091762 784 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.75□□□□□ -1.17
CiitaP79621 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CiitaP79621 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.75□□□□□ -1.17
CiitaP79621 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CiitaP79621 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CiitaP79621 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CiitaP79621 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.74□□□□□ -1.17
CiitaP79621 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.74□□□□□ -1.17
CiitaP79621 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CiitaP79621 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms