Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ufd1P70362 Gm24335-201ENSMUST00000104211 132 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm11893-201ENSMUST00000117829 491 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm9434-201ENSMUST00000118975 813 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm13545-201ENSMUST00000119044 482 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm13674-201ENSMUST00000121276 823 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm23657-201ENSMUST00000122623 294 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Gm22795-201ENSMUST00000157233 118 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6□□□□□ -1.45
Ufd1P70362 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Mir3100-201ENSMUST00000174918 65 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm8974-201ENSMUST00000175770 479 ntBASIC6□□□□□ -1.45
Ufd1P70362 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6□□□□□ -1.45
Ufd1P70362 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC6□□□□□ -1.45
Ufd1P70362 Gm6394-201ENSMUST00000197077 477 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC6□□□□□ -1.45
Ufd1P70362 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6□□□□□ -1.45
Ufd1P70362 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC6□□□□□ -1.45
Ufd1P70362 Gm45497-201ENSMUST00000211701 740 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm33778-201ENSMUST00000216884 704 ntBASIC6□□□□□ -1.45
Ufd1P70362 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6□□□□□ -1.45
Ufd1P70362 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6□□□□□ -1.45
Ufd1P70362 AC165260.5-201ENSMUST00000224640 1247 ntBASIC6□□□□□ -1.45
Ufd1P70362 AC154461.5-201ENSMUST00000225429 774 ntBASIC6□□□□□ -1.45
Ufd1P70362 Gm2840-201ENSMUST00000048361 411 ntBASIC6□□□□□ -1.45
Ufd1P70362 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Gm26130-201ENSMUST00000083171 138 ntBASIC6□□□□□ -1.45
Ufd1P70362 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC6□□□□□ -1.45
Ufd1P70362 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ufd1P70362 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ufd1P70362 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6□□□□□ -1.45
Ufd1P70362 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ufd1P70362 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Ufd1P70362 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ufd1P70362 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Ufd1P70362 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Mir678-201ENSMUST00000102114 84 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ufd1P70362 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Ufd1P70362 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm13458-201ENSMUST00000118239 367 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC5.99□□□□□ -1.45
Ufd1P70362 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm18970-201ENSMUST00000186040 938 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm7436-201ENSMUST00000187229 391 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm29195-201ENSMUST00000189038 379 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC5.99□□□□□ -1.45
Ufd1P70362 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm38337-201ENSMUST00000193986 599 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm34583-203ENSMUST00000202586 454 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm44192-201ENSMUST00000204195 556 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 AC124778.1-201ENSMUST00000216013 162 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.99□□□□□ -1.45
Ufd1P70362 CT030170.6-202ENSMUST00000223186 544 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 AC207128.1-201ENSMUST00000225928 799 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ufd1P70362 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ufd1P70362 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Ufd1P70362 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ufd1P70362 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Ufd1P70362 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 AC166574.5-201ENSMUST00000227438 1432 ntBASIC5.99□□□□□ -1.45
Ufd1P70362 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ufd1P70362 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ufd1P70362 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms