Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Shmt1P50431 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm13486-201ENSMUST00000119910 282 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm13735-201ENSMUST00000120217 670 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm14728-201ENSMUST00000122196 492 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm16357-201ENSMUST00000144091 474 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm25505-201ENSMUST00000157220 246 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Mir3473a-201ENSMUST00000175011 78 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm5283-201ENSMUST00000177874 334 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm28952-201ENSMUST00000189285 681 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm37751-201ENSMUST00000192440 1198 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm30646-201ENSMUST00000207662 180 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm9604-201ENSMUST00000211175 433 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm45782-201ENSMUST00000212670 366 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 AC122305.2-201ENSMUST00000215148 834 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm46379-201ENSMUST00000222551 265 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Shmt1P50431 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Shmt1P50431 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm24924-201ENSMUST00000084007 164 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.63□□□□□ -1.19
Shmt1P50431 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Shmt1P50431 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm26416-201ENSMUST00000104280 134 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.62□□□□□ -1.19
Shmt1P50431 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm14301-201ENSMUST00000120181 324 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm28580-201ENSMUST00000186767 88 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm37883-201ENSMUST00000194970 725 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm43243-201ENSMUST00000199964 278 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm44971-201ENSMUST00000206192 337 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm45725-201ENSMUST00000212962 337 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 AC134254.4-201ENSMUST00000223086 370 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Shmt1P50431 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm6887-201ENSMUST00000080945 482 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms