Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LtbrP50284 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LtbrP50284 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LtbrP50284 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LtbrP50284 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LtbrP50284 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC9.7□□□□□ -0.86
LtbrP50284 Gm15533-202ENSMUST00000206216 3262 ntBASIC9.7□□□□□ -0.86
LtbrP50284 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LtbrP50284 Gm45769-201ENSMUST00000204588 1828 ntBASIC9.7□□□□□ -0.86
LtbrP50284 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC9.7□□□□□ -0.86
LtbrP50284 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LtbrP50284 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LtbrP50284 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LtbrP50284 Gm37649-201ENSMUST00000192079 2232 ntBASIC9.7□□□□□ -0.86
LtbrP50284 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LtbrP50284 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC9.7□□□□□ -0.86
LtbrP50284 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
LtbrP50284 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm25725-201ENSMUST00000104528 130 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LtbrP50284 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC9.69□□□□□ -0.86
LtbrP50284 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm12378-201ENSMUST00000116171 1461 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm12814-201ENSMUST00000117091 846 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm11370-201ENSMUST00000120583 260 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm12180-201ENSMUST00000120905 661 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm12026-201ENSMUST00000120961 1024 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm13024-201ENSMUST00000121756 718 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC9.69□□□□□ -0.86
LtbrP50284 Gm24923-201ENSMUST00000178201 88 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm8266-201ENSMUST00000179745 1192 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm27538-201ENSMUST00000185065 294 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC9.69□□□□□ -0.86
LtbrP50284 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.69□□□□□ -0.86
LtbrP50284 Gm29525-201ENSMUST00000189844 699 ntBASIC9.69□□□□□ -0.86
LtbrP50284 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm29523-201ENSMUST00000191415 699 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm37661-201ENSMUST00000191863 1550 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm38056-201ENSMUST00000193928 5027 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm38104-201ENSMUST00000195121 1895 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm43890-201ENSMUST00000203437 2799 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm44989-201ENSMUST00000204749 217 ntBASIC9.69□□□□□ -0.86
LtbrP50284 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC9.69□□□□□ -0.86
LtbrP50284 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 CU024910.1-201ENSMUST00000214310 418 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm7495-201ENSMUST00000215099 426 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Gm5120-201ENSMUST00000215231 2414 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 Gm4921-201ENSMUST00000219804 992 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LtbrP50284 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Gm26107-201ENSMUST00000083972 107 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LtbrP50284 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LtbrP50284 AC163040.1-201ENSMUST00000222979 4288 ntBASIC9.69□□□□□ -0.86
LtbrP50284 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Rmi1-205ENSMUST00000225828 3594 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LtbrP50284 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LtbrP50284 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LtbrP50284 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.68□□□□□ -0.86
LtbrP50284 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 AC153881.3-201ENSMUST00000218494 1561 ntBASIC9.68□□□□□ -0.86
LtbrP50284 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LtbrP50284 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LtbrP50284 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LtbrP50284 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms