Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
P20040 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
P20040 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
P20040 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
P20040 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.3□□□□□ -1.4
P20040 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.3□□□□□ -1.4
P20040 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
P20040 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.29□□□□□ -1.4
P20040 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
P20040 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.29□□□□□ -1.4
P20040 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
P20040 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.29□□□□□ -1.4
P20040 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
P20040 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
P20040 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.29□□□□□ -1.4
P20040 Gm11926-201ENSMUST00000118520 430 ntBASIC6.29□□□□□ -1.4
P20040 Gm11928-201ENSMUST00000119323 437 ntBASIC6.29□□□□□ -1.4
P20040 Gm11796-201ENSMUST00000120208 972 ntBASIC6.29□□□□□ -1.4
P20040 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.29□□□□□ -1.4
P20040 Gm5809-201ENSMUST00000121854 529 ntBASIC6.29□□□□□ -1.4
P20040 Gm24139-201ENSMUST00000122780 288 ntBASIC6.29□□□□□ -1.4
P20040 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.29□□□□□ -1.4
P20040 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.29□□□□□ -1.4
P20040 Gm22035-201ENSMUST00000157284 228 ntBASIC6.29□□□□□ -1.4
P20040 Gm23639-201ENSMUST00000175078 132 ntBASIC6.29□□□□□ -1.4
P20040 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.29□□□□□ -1.4
P20040 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
P20040 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.29□□□□□ -1.4
P20040 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.29□□□□□ -1.4
P20040 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
P20040 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.29□□□□□ -1.4
P20040 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.29□□□□□ -1.4
P20040 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.29□□□□□ -1.4
P20040 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm45446-201ENSMUST00000209348 216 ntBASIC6.29□□□□□ -1.4
P20040 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.29□□□□□ -1.4
P20040 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.29□□□□□ -1.4
P20040 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.29□□□□□ -1.4
P20040 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.29□□□□□ -1.4
P20040 A1cf-203ENSMUST00000224400 1204 ntBASIC6.29□□□□□ -1.4
P20040 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.29□□□□□ -1.4
P20040 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.29□□□□□ -1.4
P20040 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
P20040 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.29□□□□□ -1.4
P20040 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.29□□□□□ -1.4
P20040 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.29□□□□□ -1.4
P20040 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.29□□□□□ -1.4
P20040 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.29□□□□□ -1.4
P20040 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.29□□□□□ -1.4
P20040 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
P20040 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
P20040 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.28□□□□□ -1.4
P20040 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.28□□□□□ -1.4
P20040 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
P20040 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
P20040 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.28□□□□□ -1.4
P20040 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
P20040 Mir503-201ENSMUST00000102168 71 ntBASIC6.28□□□□□ -1.4
P20040 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Gm12601-201ENSMUST00000118994 846 ntBASIC6.28□□□□□ -1.4
P20040 Mir1907-201ENSMUST00000122509 90 ntBASIC6.28□□□□□ -1.4
P20040 Gm25178-201ENSMUST00000122633 325 ntBASIC6.28□□□□□ -1.4
P20040 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
P20040 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
P20040 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms