Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm4891-201ENSMUST00000182279 912 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm28180-201ENSMUST00000189608 722 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm38203-201ENSMUST00000191815 245 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm9710-201ENSMUST00000198053 499 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm43694-201ENSMUST00000200773 1119 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm44566-201ENSMUST00000207638 304 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm45795-201ENSMUST00000211847 400 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm45739-201ENSMUST00000213094 388 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm5119-201ENSMUST00000215858 634 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmgb3O54879 AC154806.1-202ENSMUST00000227949 885 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 AC130673.1-201ENSMUST00000227992 435 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmgb3O54879 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.71□□□□□ -1.49
Hmgb3O54879 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hmgb3O54879 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmgb3O54879 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hmgb3O54879 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hmgb3O54879 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Hmgb3O54879 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC5.71□□□□□ -1.49
Hmgb3O54879 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.71□□□□□ -1.49
Hmgb3O54879 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hmgb3O54879 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Hmgb3O54879 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hmgb3O54879 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm22271-201ENSMUST00000104035 128 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm14158-201ENSMUST00000118409 308 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm8812-201ENSMUST00000118496 412 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm14034-201ENSMUST00000120147 551 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm11796-201ENSMUST00000120208 972 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm12632-201ENSMUST00000121223 495 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm2709-201ENSMUST00000142979 350 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm25721-201ENSMUST00000157496 171 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm5611-201ENSMUST00000164523 852 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC5.71□□□□□ -1.5
Hmgb3O54879 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm18752-201ENSMUST00000192876 608 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm37469-201ENSMUST00000193728 890 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm43542-201ENSMUST00000199505 379 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm44306-201ENSMUST00000203058 203 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hmgb3O54879 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.71□□□□□ -1.5
Hmgb3O54879 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm18339-201ENSMUST00000218074 888 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 AC139941.1-201ENSMUST00000221517 478 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.71□□□□□ -1.5
Hmgb3O54879 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb3O54879 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.7□□□□□ -1.5
Hmgb3O54879 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb3O54879 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms