Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc180J3QNE4 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc180J3QNE4 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc180J3QNE4 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc180J3QNE4 Gm9575-201ENSMUST00000122140 1339 ntBASIC12.91□□□□□ -0.34
Ccdc180J3QNE4 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc180J3QNE4 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Gm4956-202ENSMUST00000178869 672 ntBASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Gm8190-201ENSMUST00000199603 586 ntBASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Gm45693-201ENSMUST00000211391 1157 ntBASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 AC154558.1-201ENSMUST00000222278 415 ntBASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc180J3QNE4 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC12.9□□□□□ -0.35
Ccdc180J3QNE4 Gm37310-201ENSMUST00000195237 2968 ntBASIC12.9□□□□□ -0.35
Ccdc180J3QNE4 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC12.9□□□□□ -0.35
Ccdc180J3QNE4 Gm37457-201ENSMUST00000193639 2433 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm9226-201ENSMUST00000188352 3489 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm21152-201ENSMUST00000190271 3483 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm28846-201ENSMUST00000189161 368 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm29784-201ENSMUST00000196217 406 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 CT009713.1-201ENSMUST00000224828 853 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm21731-201ENSMUST00000079524 489 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm43128-201ENSMUST00000202212 1621 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm44996-201ENSMUST00000208787 2980 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm43612-201ENSMUST00000196087 3207 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm27602-201ENSMUST00000183861 111 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 AC154806.5-204ENSMUST00000228900 867 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Rian-209ENSMUST00000182406 3476 ntBASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc180J3QNE4 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 AC171003.1-201ENSMUST00000221667 1665 ntBASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm22953-201ENSMUST00000116724 101 ntBASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm4904-201ENSMUST00000178243 1195 ntBASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm27018-201ENSMUST00000181136 225 ntBASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm37285-201ENSMUST00000194465 1139 ntBASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc180J3QNE4 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc180J3QNE4 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms