Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm23484-201ENSMUST00000104178 131 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm22600-201ENSMUST00000157598 269 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm29435-201ENSMUST00000191310 689 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm44471-201ENSMUST00000197963 100 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm4270-201ENSMUST00000209666 406 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm45782-201ENSMUST00000212670 366 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm46379-201ENSMUST00000222551 265 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Ddx56Q9D0R4 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm25276-201ENSMUST00000104300 124 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm22152-201ENSMUST00000116966 125 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm12710-201ENSMUST00000119011 216 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm15665-201ENSMUST00000119116 847 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm12731-201ENSMUST00000120932 268 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm22361-201ENSMUST00000158435 176 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Mir3072-201ENSMUST00000175610 83 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm5181-201ENSMUST00000183140 971 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm28507-201ENSMUST00000189737 703 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm44213-201ENSMUST00000204977 703 ntBASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC7.73□□□□□ -1.17
Ddx56Q9D0R4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms