Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Gm14465-201ENSMUST00000120603 567 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm11257-201ENSMUST00000121313 315 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm16026-205ENSMUST00000162923 641 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Mir378d-201ENSMUST00000184232 110 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm20690-202ENSMUST00000195126 355 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm43926-201ENSMUST00000203978 430 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm18960-201ENSMUST00000222962 713 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc47Q9D024 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm8421-201ENSMUST00000119439 305 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm14612-201ENSMUST00000121522 881 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm23657-201ENSMUST00000122623 294 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm10157-201ENSMUST00000139408 343 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm23639-201ENSMUST00000175078 132 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm43108-201ENSMUST00000200525 293 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm44380-201ENSMUST00000203125 293 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm44258-201ENSMUST00000204925 301 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm44590-201ENSMUST00000206161 391 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm44982-201ENSMUST00000208795 471 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm16020-201ENSMUST00000084281 210 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.35□□□□□ -1.07
Ccdc47Q9D024 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Ccdc47Q9D024 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm15739-201ENSMUST00000118049 872 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm8916-201ENSMUST00000119732 949 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm37017-201ENSMUST00000195266 747 ntBASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.34□□□□□ -1.07
Ccdc47Q9D024 Gm42938-201ENSMUST00000198414 1072 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms