Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm19649-201ENSMUST00000201126 822 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm42529-201ENSMUST00000201843 741 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm34149-201ENSMUST00000203547 304 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm44050-201ENSMUST00000204263 527 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 AC134577.2-201ENSMUST00000228541 715 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm26244-201ENSMUST00000083435 164 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Lrrc28-201ENSMUST00000032775 1817 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm12430-201ENSMUST00000121539 1322 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm42701-201ENSMUST00000196117 1657 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm26209-201ENSMUST00000103852 110 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm25803-201ENSMUST00000104419 131 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm23835-201ENSMUST00000104439 132 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13614-201ENSMUST00000117306 503 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm14682-201ENSMUST00000117977 524 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm16412-201ENSMUST00000121602 273 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm6044-201ENSMUST00000121819 499 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13131-201ENSMUST00000122228 321 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm10177-202ENSMUST00000161698 207 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm28478-201ENSMUST00000185802 183 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm43384-201ENSMUST00000200569 637 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 CU024910.1-201ENSMUST00000214310 418 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 AC112142.1-206ENSMUST00000228136 982 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm22444-201ENSMUST00000093693 108 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm36938-201ENSMUST00000191612 2696 ntBASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Pcdhb7Q8CDY9 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms