Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm2709-201ENSMUST00000142979 350 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm5181-201ENSMUST00000183140 971 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm8524-201ENSMUST00000186232 379 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm29435-201ENSMUST00000191310 689 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm43905-201ENSMUST00000204516 204 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm24046-201ENSMUST00000083111 165 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ccdc38Q8CDN8 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm6491-201ENSMUST00000118273 990 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm14251-201ENSMUST00000122133 279 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm4613-201ENSMUST00000165488 276 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm2505-201ENSMUST00000200413 825 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm42734-201ENSMUST00000201656 878 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Ccdc38Q8CDN8 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm12344-201ENSMUST00000117087 329 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm13038-201ENSMUST00000119886 459 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm13525-201ENSMUST00000120607 478 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm22275-201ENSMUST00000122470 310 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm22569-201ENSMUST00000175545 124 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Mir1231-201ENSMUST00000175639 81 ntBASIC7.97□□□□□ -1.13
Ccdc38Q8CDN8 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms