Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm27014-201ENSMUST00000182658 937 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Mir8114-201ENSMUST00000183582 111 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm28114-201ENSMUST00000187232 379 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm29214-201ENSMUST00000190216 570 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm38328-201ENSMUST00000195582 317 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm18430-201ENSMUST00000197534 682 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm2860-201ENSMUST00000199226 707 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm2221-201ENSMUST00000209342 418 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm45725-201ENSMUST00000212962 337 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Atg4aQ8C9S8 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Atg4aQ8C9S8 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Atg4aQ8C9S8 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm12903-201ENSMUST00000121015 544 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Mir1929-201ENSMUST00000158635 93 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm25574-201ENSMUST00000175245 249 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm4956-202ENSMUST00000178869 672 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm26570-201ENSMUST00000180672 342 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm7412-201ENSMUST00000191692 605 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm6166-201ENSMUST00000098689 409 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Atg4aQ8C9S8 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm26419-201ENSMUST00000104272 133 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm12104-201ENSMUST00000120359 979 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm25640-201ENSMUST00000175378 125 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm22053-201ENSMUST00000083394 200 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 152.4 ms