Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trub1Q8C0D0 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm22707-201ENSMUST00000103834 110 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm8624-201ENSMUST00000118083 432 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm8421-201ENSMUST00000119439 305 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm13486-201ENSMUST00000119910 282 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm18191-201ENSMUST00000174624 824 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm23639-201ENSMUST00000175078 132 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm29369-201ENSMUST00000190674 615 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm5314-201ENSMUST00000204852 466 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm45100-201ENSMUST00000209153 391 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm46424-201ENSMUST00000221567 168 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm26130-201ENSMUST00000083171 138 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.26□□□□□ -1.25
Trub1Q8C0D0 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Mir760-201ENSMUST00000103257 119 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm24284-201ENSMUST00000104240 142 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm11263-201ENSMUST00000121853 749 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm24286-201ENSMUST00000157632 128 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm7420-201ENSMUST00000162836 842 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm8192-201ENSMUST00000182196 958 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm21577-201ENSMUST00000190823 697 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm43147-201ENSMUST00000196944 542 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm3511-201ENSMUST00000199823 204 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Trub1Q8C0D0 Gm7986-201ENSMUST00000221336 551 ntBASIC7.25□□□□□ -1.25
Trub1Q8C0D0 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms