Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Snora21-201ENSMUST00000082967 137 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm29486-201ENSMUST00000088648 372 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm13183-201ENSMUST00000118615 789 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm13754-201ENSMUST00000120486 998 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm12175-201ENSMUST00000122081 345 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm8089-201ENSMUST00000122463 968 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28739-201ENSMUST00000185415 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28219-201ENSMUST00000185452 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28542-201ENSMUST00000185545 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28303-201ENSMUST00000185642 747 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29244-201ENSMUST00000185825 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29437-201ENSMUST00000185865 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29412-201ENSMUST00000185869 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28910-201ENSMUST00000185921 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28812-201ENSMUST00000185963 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29468-201ENSMUST00000185978 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28335-201ENSMUST00000186204 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28854-201ENSMUST00000186218 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28636-201ENSMUST00000186353 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28452-201ENSMUST00000186623 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29298-201ENSMUST00000186704 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28185-201ENSMUST00000186815 694 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28227-201ENSMUST00000186862 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28796-201ENSMUST00000186905 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29659-201ENSMUST00000187063 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28473-201ENSMUST00000187325 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28558-201ENSMUST00000187373 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28682-201ENSMUST00000187430 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28738-201ENSMUST00000187480 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28949-201ENSMUST00000187805 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28773-201ENSMUST00000187925 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29319-201ENSMUST00000188060 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29422-201ENSMUST00000188062 694 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28734-201ENSMUST00000188104 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28787-201ENSMUST00000188357 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29312-201ENSMUST00000188724 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29451-201ENSMUST00000188862 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29637-201ENSMUST00000188877 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29033-201ENSMUST00000189114 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29614-201ENSMUST00000189263 694 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28751-201ENSMUST00000189287 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29559-201ENSMUST00000189412 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28272-201ENSMUST00000189512 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28483-201ENSMUST00000189519 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28123-201ENSMUST00000189725 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28368-201ENSMUST00000189804 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29119-201ENSMUST00000189973 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28716-201ENSMUST00000190217 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29239-201ENSMUST00000190304 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28837-201ENSMUST00000190397 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28968-201ENSMUST00000190413 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28531-201ENSMUST00000190529 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm28165-201ENSMUST00000190669 694 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm29181-201ENSMUST00000191288 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm38229-201ENSMUST00000191931 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm32347-201ENSMUST00000192944 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm38121-201ENSMUST00000193213 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm38035-201ENSMUST00000194427 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm38350-201ENSMUST00000194789 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm37990-201ENSMUST00000195821 696 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm44471-201ENSMUST00000197963 100 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm3511-201ENSMUST00000199823 204 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm44411-201ENSMUST00000204172 349 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm17822-201ENSMUST00000204307 351 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm4042-201ENSMUST00000216946 637 ntBASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp40Q8BWR4 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms