Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm11371-201ENSMUST00000120294 385 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm2709-201ENSMUST00000142979 350 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm23673-201ENSMUST00000157474 298 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm18191-201ENSMUST00000174624 824 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm7481-201ENSMUST00000182020 995 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm27972-201ENSMUST00000184720 137 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm28416-201ENSMUST00000188334 292 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm10925-201ENSMUST00000189941 678 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm42734-201ENSMUST00000201656 878 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 AV026068-219ENSMUST00000224148 933 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 AC152169.2-201ENSMUST00000224558 613 ntBASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smarcc2Q6PDG5 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Smarcc2Q6PDG5 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.4□□□□□ -1.07
Smarcc2Q6PDG5 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Smarcc2Q6PDG5 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Smarcc2Q6PDG5 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Smarcc2Q6PDG5 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm25509-201ENSMUST00000116985 106 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm8916-201ENSMUST00000119732 949 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm7341-201ENSMUST00000192183 926 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm37631-201ENSMUST00000192275 364 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm38079-201ENSMUST00000195603 154 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm29759-201ENSMUST00000205860 327 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 AV026068-229ENSMUST00000225516 595 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smarcc2Q6PDG5 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Smarcc2Q6PDG5 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms