Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm14893-201ENSMUST00000117904 282 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm37349-201ENSMUST00000194205 624 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm3511-201ENSMUST00000199823 204 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm3549-201ENSMUST00000203873 794 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm2975-201ENSMUST00000209710 820 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.47□□□□□ -1.05
Vps54Q5SPW0 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.46□□□□□ -1.05
Vps54Q5SPW0 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.46□□□□□ -1.05
Vps54Q5SPW0 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Vps54Q5SPW0 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Vps54Q5SPW0 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.46□□□□□ -1.05
Vps54Q5SPW0 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm24519-201ENSMUST00000104507 132 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm12468-201ENSMUST00000116189 404 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm14000-201ENSMUST00000118670 233 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm11689-201ENSMUST00000120766 302 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm12754-201ENSMUST00000121908 454 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm25969-201ENSMUST00000157166 132 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm24680-201ENSMUST00000158759 126 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm20223-201ENSMUST00000199932 805 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm8667-201ENSMUST00000211112 449 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Vps54Q5SPW0 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm25311-201ENSMUST00000104136 132 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm23740-201ENSMUST00000157385 100 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm27360-201ENSMUST00000183487 80 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Mir6987-201ENSMUST00000184789 73 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm27178-201ENSMUST00000184962 340 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm37871-201ENSMUST00000194973 688 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm42580-201ENSMUST00000197223 753 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm43235-201ENSMUST00000200121 297 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm24451-201ENSMUST00000083353 133 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Vps54Q5SPW0 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms