Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm14248-201ENSMUST00000117790 544 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm13521-201ENSMUST00000118922 866 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm14103-201ENSMUST00000119075 366 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm15574-201ENSMUST00000119937 405 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm11585-201ENSMUST00000120901 569 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm13466-201ENSMUST00000121515 999 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm25557-201ENSMUST00000158084 315 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm23897-201ENSMUST00000158110 158 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm23633-201ENSMUST00000175293 119 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm27025-201ENSMUST00000182392 942 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm29383-201ENSMUST00000188284 480 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm37337-201ENSMUST00000192601 993 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm8407-201ENSMUST00000192719 427 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm42767-201ENSMUST00000198583 632 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm43558-201ENSMUST00000200155 210 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm43967-201ENSMUST00000203787 301 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm19201-201ENSMUST00000210127 778 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 AC144733.1-201ENSMUST00000222893 1289 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Dalir-201ENSMUST00000188773 2170 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 AC124675.1-201ENSMUST00000226263 1390 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm27013-202ENSMUST00000205067 1436 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Gm43544-201ENSMUST00000196474 2472 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp48Q3V0C5 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm12713-201ENSMUST00000118404 764 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm24241-201ENSMUST00000157787 145 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm6472-202ENSMUST00000187973 582 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm37241-201ENSMUST00000191736 523 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm19161-201ENSMUST00000217958 737 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 CT009728.1-201ENSMUST00000225228 1050 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 AC125087.1-201ENSMUST00000227552 514 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 AC156574.2-201ENSMUST00000228023 282 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Gm25926-201ENSMUST00000082899 160 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.44□□□□□ -0.9
Usp48Q3V0C5 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp48Q3V0C5 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms