Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 AC140280.1-201ENSMUST00000227826 1847 ntBASIC9.45□□□□□ -0.9
Sf3b2Q3UJB0 Gm43219-201ENSMUST00000197972 1937 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm37536-201ENSMUST00000194710 2491 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm20396-201ENSMUST00000173358 745 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm29141-201ENSMUST00000190357 882 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm38226-201ENSMUST00000192207 521 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm2602-201ENSMUST00000202112 571 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gm18012-201ENSMUST00000204558 773 ntBASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sf3b2Q3UJB0 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm43168-201ENSMUST00000201039 1612 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm24272-201ENSMUST00000102329 98 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm24069-201ENSMUST00000104512 127 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm5255-201ENSMUST00000120125 642 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm13357-201ENSMUST00000120528 537 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm5401-201ENSMUST00000122444 365 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm18980-201ENSMUST00000199098 1079 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 AC164424.3-201ENSMUST00000220809 148 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Gm19340-201ENSMUST00000221995 345 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 AC166358.8-201ENSMUST00000223288 105 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 AC124739.1-201ENSMUST00000223433 148 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 AV026068-219ENSMUST00000224148 933 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Mir138-1-201ENSMUST00000083480 99 ntBASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Sf3b2Q3UJB0 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sf3b2Q3UJB0 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC9.42□□□□□ -0.9
Sf3b2Q3UJB0 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sf3b2Q3UJB0 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms