Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm10145-201ENSMUST00000077776 462 ntBASIC5.77□□□□□ -1.49
Cdx4Q07424 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm10705-201ENSMUST00000098980 461 ntBASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm37274-201ENSMUST00000192167 1682 ntBASIC5.77□□□□□ -1.49
Cdx4Q07424 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 AC126251.1-201ENSMUST00000228170 2707 ntBASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm38173-201ENSMUST00000193126 2314 ntBASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 CT025619.3-201ENSMUST00000216299 3267 ntBASIC5.77□□□□□ -1.49
Cdx4Q07424 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Cdx4Q07424 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx4Q07424 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 AC166341.5-201ENSMUST00000222206 1400 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 AC154257.1-201ENSMUST00000224811 1525 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm22543-201ENSMUST00000104347 94 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm15018-201ENSMUST00000117090 633 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm11558-201ENSMUST00000118454 459 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm12327-201ENSMUST00000121729 1168 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm4781-201ENSMUST00000167995 781 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm8164-201ENSMUST00000169120 1192 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm2058-201ENSMUST00000178791 560 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm28006-201ENSMUST00000183841 122 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Mir6374-201ENSMUST00000184003 107 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm7542-201ENSMUST00000201140 777 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm7972-201ENSMUST00000208434 1137 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm18026-201ENSMUST00000222789 727 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Mir135b-201ENSMUST00000083501 97 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Grik1-210ENSMUST00000228034 2708 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm17083-201ENSMUST00000165849 1366 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Gm10388-201ENSMUST00000205001 2936 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx4Q07424 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx4Q07424 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx4Q07424 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC5.76□□□□□ -1.49
Cdx4Q07424 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms