Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.59□□□□□ -1.35
Col8a1Q00780 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm40853-201ENSMUST00000221342 582 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm9472-201ENSMUST00000221625 526 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm9255-201ENSMUST00000223225 581 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Retreg1-203ENSMUST00000226438 2783 ntBASIC6.59□□□□□ -1.35
Col8a1Q00780 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col8a1Q00780 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col8a1Q00780 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col8a1Q00780 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col8a1Q00780 Gm43621-201ENSMUST00000202733 2022 ntBASIC6.59□□□□□ -1.36
Col8a1Q00780 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col8a1Q00780 Gm16487-201ENSMUST00000105048 4037 ntBASIC6.59□□□□□ -1.36
Col8a1Q00780 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col8a1Q00780 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col8a1Q00780 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col8a1Q00780 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 AC122346.2-201ENSMUST00000224326 2931 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm11799-201ENSMUST00000116110 460 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm13240-201ENSMUST00000120042 565 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm15188-201ENSMUST00000121264 704 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm24532-201ENSMUST00000157951 286 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm23663-201ENSMUST00000158045 80 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm17655-201ENSMUST00000167969 255 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm17044-201ENSMUST00000168549 828 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm18501-201ENSMUST00000185363 664 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm21181-201ENSMUST00000186249 330 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm29577-201ENSMUST00000186427 693 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm18875-201ENSMUST00000188563 882 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm42593-201ENSMUST00000198469 377 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm19161-201ENSMUST00000217958 737 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 AC164297.5-201ENSMUST00000224365 198 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm24613-201ENSMUST00000083266 130 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm23102-201ENSMUST00000083724 116 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col8a1Q00780 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.58□□□□□ -1.36
Col8a1Q00780 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col8a1Q00780 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms