Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 AC187103.1-201ENSMUST00000224641 1475 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Mir680-1-201ENSMUST00000102257 109 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm14772-201ENSMUST00000116562 514 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm8245-201ENSMUST00000182434 987 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Mir6911-201ENSMUST00000184241 69 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm27804-201ENSMUST00000185135 119 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm7867-201ENSMUST00000189856 546 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm37439-201ENSMUST00000193150 856 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm38018-201ENSMUST00000195651 540 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm24451-201ENSMUST00000083353 133 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC9.13□□□□□ -0.95
Smarcc1P97496 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Gm37953-201ENSMUST00000195293 1884 ntBASIC9.13□□□□□ -0.95
Smarcc1P97496 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smarcc1P97496 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 AC154522.1-201ENSMUST00000224647 1903 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm5752-201ENSMUST00000117771 594 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm6027-201ENSMUST00000121467 756 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm10913-201ENSMUST00000133732 463 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm2709-201ENSMUST00000142979 350 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm8183-201ENSMUST00000183134 980 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 AC117240.1-201ENSMUST00000199436 61 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.12□□□□□ -0.95
Smarcc1P97496 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smarcc1P97496 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms