Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.78□□□□□ -1.16
CiitaP79621 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm22604-201ENSMUST00000157604 311 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm26183-201ENSMUST00000157685 139 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm24228-201ENSMUST00000158829 129 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm16138-201ENSMUST00000159341 821 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Gm18699-201ENSMUST00000190713 243 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm5154-201ENSMUST00000203971 399 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm46379-201ENSMUST00000222551 265 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CiitaP79621 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CiitaP79621 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.77□□□□□ -1.16
CiitaP79621 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CiitaP79621 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.77□□□□□ -1.16
CiitaP79621 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CiitaP79621 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CiitaP79621 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CiitaP79621 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CiitaP79621 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm12174-201ENSMUST00000119853 813 ntBASIC7.77□□□□□ -1.17
CiitaP79621 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm22533-201ENSMUST00000158821 274 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm6434-201ENSMUST00000163316 372 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm26528-201ENSMUST00000181965 283 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm42782-201ENSMUST00000197286 522 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.77□□□□□ -1.17
CiitaP79621 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.77□□□□□ -1.17
CiitaP79621 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm10126-201ENSMUST00000221732 168 ntBASIC7.77□□□□□ -1.17
CiitaP79621 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.77□□□□□ -1.17
CiitaP79621 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.77□□□□□ -1.17
CiitaP79621 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm22865-201ENSMUST00000083949 214 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CiitaP79621 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.77□□□□□ -1.17
CiitaP79621 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CiitaP79621 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.77□□□□□ -1.17
CiitaP79621 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CiitaP79621 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.77□□□□□ -1.17
CiitaP79621 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Gm13444-201ENSMUST00000119445 522 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm23657-201ENSMUST00000122623 294 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CiitaP79621 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm3760-201ENSMUST00000167475 804 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm24157-201ENSMUST00000175265 111 ntBASIC7.76□□□□□ -1.17
CiitaP79621 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CiitaP79621 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms