Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37481-201ENSMUST00000195176 403 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm8861-201ENSMUST00000196346 832 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm6909-201ENSMUST00000209825 989 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm22971-201ENSMUST00000083305 97 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm44530-201ENSMUST00000207920 3559 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Phf7-206ENSMUST00000228437 1373 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm45117-201ENSMUST00000207250 1774 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm6181-201ENSMUST00000117187 264 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm16056-201ENSMUST00000119293 135 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm16407-201ENSMUST00000122134 567 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm15928-201ENSMUST00000122455 280 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm24530-201ENSMUST00000157948 288 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm17097-201ENSMUST00000166414 714 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm27595-201ENSMUST00000184579 112 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm40319-201ENSMUST00000199785 481 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm18469-201ENSMUST00000208850 439 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm45432-201ENSMUST00000210391 416 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm2089-201ENSMUST00000218294 479 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm19095-201ENSMUST00000220533 730 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.23□□□□□ -1.09
Hmgb1P63158 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb1P63158 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.23□□□□□ -1.09
Hmgb1P63158 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb1P63158 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmgb1P63158 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Hmgb1P63158 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Hmgb1P63158 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm42440-201ENSMUST00000197906 2284 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm22022-201ENSMUST00000104355 127 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm4910-201ENSMUST00000119605 366 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm14380-201ENSMUST00000122298 431 ntBASIC8.22□□□□□ -1.09
Hmgb1P63158 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Hmgb1P63158 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms