Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm25810-201ENSMUST00000082752 108 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Rfx1P48377 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm45263-201ENSMUST00000210377 1375 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm38105-201ENSMUST00000192112 2621 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Rfx1P48377 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rfx1P48377 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.96□□□□□ -0.97
Rfx1P48377 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rfx1P48377 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rfx1P48377 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.96□□□□□ -0.97
Rfx1P48377 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm23706-201ENSMUST00000104369 82 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm5228-201ENSMUST00000117186 357 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm8802-201ENSMUST00000118633 740 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm13502-201ENSMUST00000121574 684 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm16284-201ENSMUST00000140995 400 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm25266-201ENSMUST00000158521 304 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm6100-201ENSMUST00000180253 403 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm28688-201ENSMUST00000187301 268 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm43555-201ENSMUST00000196588 310 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm35570-201ENSMUST00000198730 681 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm20223-201ENSMUST00000199932 805 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm43922-201ENSMUST00000205071 328 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC8.96□□□□□ -0.98
Rfx1P48377 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm45551-201ENSMUST00000211459 928 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
Rfx1P48377 AL772397.1-201ENSMUST00000216707 606 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Gm21321-201ENSMUST00000220179 446 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 AC163660.3-202ENSMUST00000224917 464 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 AC099612.2-201ENSMUST00000226824 721 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rfx1P48377 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rfx1P48377 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Rfx1P48377 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Rfx1P48377 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Rfx1P48377 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rfx1P48377 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.96□□□□□ -0.98
Rfx1P48377 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm24938-201ENSMUST00000102225 110 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm13229-201ENSMUST00000118238 340 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm12988-201ENSMUST00000119054 478 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm12748-201ENSMUST00000120763 504 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm24063-201ENSMUST00000157491 105 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm22424-201ENSMUST00000158527 87 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Mir6999-201ENSMUST00000183498 61 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm17867-201ENSMUST00000188981 391 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm44243-201ENSMUST00000204323 692 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms