Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC8.36□□□□□ -1.07
Traf1P39428 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm14727-201ENSMUST00000118526 525 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm13900-201ENSMUST00000119402 498 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm5255-201ENSMUST00000120125 642 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm12535-201ENSMUST00000121025 484 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm14721-201ENSMUST00000121381 525 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Traf1P39428 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm21839-201ENSMUST00000179536 378 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm43396-201ENSMUST00000197506 706 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm43926-201ENSMUST00000203978 430 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm18690-201ENSMUST00000204488 985 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm9110-201ENSMUST00000219035 617 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.36□□□□□ -1.07
Traf1P39428 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.36□□□□□ -1.07
Traf1P39428 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Traf1P39428 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Traf1P39428 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.36□□□□□ -1.07
Traf1P39428 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Gm11343-201ENSMUST00000120579 599 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Gm13221-201ENSMUST00000121712 430 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Gm10913-201ENSMUST00000133732 463 ntBASIC8.35□□□□□ -1.07
Traf1P39428 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.35□□□□□ -1.07
Traf1P39428 Gm16027-201ENSMUST00000161618 758 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Gm23139-201ENSMUST00000179454 132 ntBASIC8.35□□□□□ -1.07
Traf1P39428 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.35□□□□□ -1.07
Traf1P39428 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.35□□□□□ -1.07
Traf1P39428 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Gm19035-202ENSMUST00000194575 959 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Gm43203-201ENSMUST00000200130 558 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Traf1P39428 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.35□□□□□ -1.07
Traf1P39428 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Gm18960-201ENSMUST00000222962 713 ntBASIC8.35□□□□□ -1.07
Traf1P39428 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Traf1P39428 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Traf1P39428 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms