Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm43497-201ENSMUST00000201137 2316 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm13545-201ENSMUST00000119044 482 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm12181-201ENSMUST00000121448 531 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm16407-201ENSMUST00000122134 567 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm22275-201ENSMUST00000122470 310 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm22795-201ENSMUST00000157233 118 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm25164-201ENSMUST00000158908 116 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm5205-201ENSMUST00000182253 1003 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm28413-201ENSMUST00000189369 291 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm29008-201ENSMUST00000189387 298 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm37328-201ENSMUST00000193191 640 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm38337-201ENSMUST00000193986 599 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm44356-201ENSMUST00000196731 111 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm34583-203ENSMUST00000202586 454 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 AC159205.2-201ENSMUST00000223759 816 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 AC100209.1-201ENSMUST00000225562 409 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 AC137117.3-201ENSMUST00000226265 485 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 AC138604.2-201ENSMUST00000226620 921 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm2840-201ENSMUST00000048361 411 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm5590-201ENSMUST00000059110 345 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm6823-201ENSMUST00000120791 1839 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.73□□□□□ -1.49
Hmgb3O54879 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hmgb3O54879 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hmgb3O54879 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm23358-201ENSMUST00000103887 110 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm22022-201ENSMUST00000104355 127 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm6382-201ENSMUST00000118873 942 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm14016-201ENSMUST00000119095 486 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm14796-201ENSMUST00000121216 959 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 n-R5s47-201ENSMUST00000122516 119 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC5.72□□□□□ -1.49
Hmgb3O54879 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hmgb3O54879 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm17051-201ENSMUST00000170787 487 ntBASIC5.72□□□□□ -1.49
Hmgb3O54879 Gm7763-201ENSMUST00000182220 1006 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms