Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm22262-201ENSMUST00000158713 86 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm24228-201ENSMUST00000158829 129 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm26729-201ENSMUST00000180744 352 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm28952-201ENSMUST00000189285 681 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm29141-201ENSMUST00000190357 882 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clrn2B2RVW2 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Pramel-201ENSMUST00000118979 1383 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm13878-201ENSMUST00000117986 577 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm12573-201ENSMUST00000118158 286 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm12740-201ENSMUST00000118794 308 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm14070-201ENSMUST00000120773 428 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm6451-201ENSMUST00000121488 717 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 BC064078-201ENSMUST00000122939 570 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm28958-201ENSMUST00000185864 703 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm38022-201ENSMUST00000191762 403 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm38068-201ENSMUST00000192546 540 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm18430-201ENSMUST00000197534 682 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm19175-201ENSMUST00000199895 916 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm44565-201ENSMUST00000208194 269 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 AC164295.1-201ENSMUST00000224861 186 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC8.28□□□□□ -1.08
Clrn2B2RVW2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Clrn2B2RVW2 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm11501-201ENSMUST00000118039 581 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm13669-201ENSMUST00000122366 457 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm23756-201ENSMUST00000157582 114 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm27186-201ENSMUST00000184223 307 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm28377-201ENSMUST00000189695 720 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Gm37189-201ENSMUST00000192131 298 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clrn2B2RVW2 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.27□□□□□ -1.09
Clrn2B2RVW2 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms