Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm24835-201ENSMUST00000116777 111 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm4919-201ENSMUST00000117825 604 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm14677-201ENSMUST00000117866 486 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm15923-201ENSMUST00000119300 1169 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm15381-201ENSMUST00000121501 1156 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm24050-201ENSMUST00000158623 290 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm26159-201ENSMUST00000158968 104 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm18354-201ENSMUST00000173515 1068 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm20432-201ENSMUST00000173716 250 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm24754-201ENSMUST00000177997 107 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm26933-201ENSMUST00000182320 827 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm28414-201ENSMUST00000190111 294 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm20811-201ENSMUST00000190500 553 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm37399-201ENSMUST00000195224 416 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm44135-201ENSMUST00000205221 368 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 AC115047.1-201ENSMUST00000213795 322 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm9289-201ENSMUST00000221269 606 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 AC129537.1-202ENSMUST00000226619 430 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 mt-Tr-201ENSMUST00000082412 68 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm24696-201ENSMUST00000083878 134 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 AC101875.1-201ENSMUST00000222666 2223 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm6823-201ENSMUST00000120791 1839 ntBASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ube3bQ9ES34 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Dennd6a-205ENSMUST00000224378 2424 ntBASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.46□□□□□ -0.89
Ube3bQ9ES34 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Mir763-201ENSMUST00000103249 120 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm12393-201ENSMUST00000117084 848 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm14156-201ENSMUST00000121538 483 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm13440-201ENSMUST00000121665 496 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm23426-201ENSMUST00000122483 318 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm23117-201ENSMUST00000158482 108 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Gm17038-201ENSMUST00000166586 494 ntBASIC9.46□□□□□ -0.9
Ube3bQ9ES34 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms