Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm28677-202ENSMUST00000186904 615 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm29562-201ENSMUST00000190113 904 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm37929-201ENSMUST00000195116 493 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm43008-201ENSMUST00000202346 286 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm44984-201ENSMUST00000207802 394 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.39□□□□□ -1.39
Hmg20aQ9DC33 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm26146-201ENSMUST00000104478 185 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm11907-201ENSMUST00000118918 1007 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm13323-201ENSMUST00000120245 1151 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm14749-201ENSMUST00000121269 333 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm5205-201ENSMUST00000182253 1003 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm18970-201ENSMUST00000186040 938 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm5251-201ENSMUST00000188959 472 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm9689-201ENSMUST00000210009 428 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 AC132384.10-201ENSMUST00000217862 1204 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 AC162940.1-201ENSMUST00000224745 1167 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmg20aQ9DC33 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmg20aQ9DC33 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms